Education
2015-present Ph.D. student Psychological and Brain Sciences and Cognitive Science, Indiana University, Bloomington
2014-2015 M.Sc. with Distinction in Palaeoanthropology and Palaeolithic Archaeology, University College London
Dissertation: "Asymmetry of the Modern Human Endocranium" - awarded Distinction
2010-2014 B.A. with Distinction, Anthropology and Cognitive Science, Indiana University, Bloomington
Minor: Arabic (Near Eastern Languages and Culture)
Honors Thesis: The Association Between Handedness and Structural Asymmetries of the Human Brain
2014-2015 M.Sc. with Distinction in Palaeoanthropology and Palaeolithic Archaeology, University College London
Dissertation: "Asymmetry of the Modern Human Endocranium" - awarded Distinction
2010-2014 B.A. with Distinction, Anthropology and Cognitive Science, Indiana University, Bloomington
Minor: Arabic (Near Eastern Languages and Culture)
Honors Thesis: The Association Between Handedness and Structural Asymmetries of the Human Brain
Publications
"The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services" Paolo Avesani, Brent McPherson, Lindsey Kitchell, Cesar Caiafa, Daniel Bullock, Soichi Hayashi, Andrew Patterson, Emanuele Olivetti, Robert Henschel, Eleftherios Garyfallidis, Olaf Sporns, Andrew Saykin, Lei Wang, Ivo Dinov, David Hancock, Bradley Caron, Yiming Qian, and Franco Pestilli
Shape Analysis of White Matter Tracts via the Laplace-Beltrami Spectrum, Kitchell, Lindsey, Daniel Bullock, Soichi Hayashis, Franco Pestilli. Shape in Medical Imaging Workshop at MICCAI, Granada, Spain 2018 Online or PDF
Associative white matter tracts in the posterior human brain with different degrees of investigative attention. Bullock, D., Takemura, H., Caiafa, C. F., Kitchell, L., McPherson, B., Caron, B., and Pestilli, F. (2019) Brain Structure and Function.
In Preparation:
Large-scale population analysis of the human white matter morphospace. Kitchell, L., Bullock, D., and Pestilli F.
Accurate prediction of three neuropsychological disorders using white matter morphology. Kitchell, L., Bullock, D., and Pestilli F.
Advanced white matter mapping in the subconcussive brain. Caron, B. Bullock, D., Kitchell, L., Chen, H., Newman, S., Port, N., and Pestilli, F.
Open repository of repeated-measures arrays encoding diffusion MRI and tractography data for high-performance optimization and machine learning applications. Caiafa, C. Avesani, P., Hayashi, S., McPherson, B., Kitchell, L., Lu, X., Gugnani, S., Panda, DK., Sporns, O., Saykin, A., Pestilli, F.
Improved prediction of the biological properties of the human white matter tracts. Caiafa, C., Hayashi, S., McPherson, B., Kitchell, L., and Pestilli, F.
Brain-Life.org: Reproducible applications and data management using cloud computing for large-scale, brain population analysis. Hayashi, S., Kitchell, L., McPherson, B., Bullock, D. Caron, B., Garyfallidis, E., Henschel, R., Dinov, I., Wang, L., Saykin, A., Sporns, O. and Pestilli, F.
Master's Thesis:
Kitchell, Lindsey. Asymmetry of the Modern Human Endocranium. University College London Master's Thesis
Shape Analysis of White Matter Tracts via the Laplace-Beltrami Spectrum, Kitchell, Lindsey, Daniel Bullock, Soichi Hayashis, Franco Pestilli. Shape in Medical Imaging Workshop at MICCAI, Granada, Spain 2018 Online or PDF
Associative white matter tracts in the posterior human brain with different degrees of investigative attention. Bullock, D., Takemura, H., Caiafa, C. F., Kitchell, L., McPherson, B., Caron, B., and Pestilli, F. (2019) Brain Structure and Function.
In Preparation:
Large-scale population analysis of the human white matter morphospace. Kitchell, L., Bullock, D., and Pestilli F.
Accurate prediction of three neuropsychological disorders using white matter morphology. Kitchell, L., Bullock, D., and Pestilli F.
Advanced white matter mapping in the subconcussive brain. Caron, B. Bullock, D., Kitchell, L., Chen, H., Newman, S., Port, N., and Pestilli, F.
Open repository of repeated-measures arrays encoding diffusion MRI and tractography data for high-performance optimization and machine learning applications. Caiafa, C. Avesani, P., Hayashi, S., McPherson, B., Kitchell, L., Lu, X., Gugnani, S., Panda, DK., Sporns, O., Saykin, A., Pestilli, F.
Improved prediction of the biological properties of the human white matter tracts. Caiafa, C., Hayashi, S., McPherson, B., Kitchell, L., and Pestilli, F.
Brain-Life.org: Reproducible applications and data management using cloud computing for large-scale, brain population analysis. Hayashi, S., Kitchell, L., McPherson, B., Bullock, D. Caron, B., Garyfallidis, E., Henschel, R., Dinov, I., Wang, L., Saykin, A., Sporns, O. and Pestilli, F.
Master's Thesis:
Kitchell, Lindsey. Asymmetry of the Modern Human Endocranium. University College London Master's Thesis
Conference Presentations
2019 Daniel Bullock, Soichi Hayashi, Lindsey Kitchell, Brent McPherson, Bradley Caron, Franco Pestilli. White Matter Mapping on brainlife.io: A Findable, Accessible, Interoperable, Reusable Implementation. OHBM 2019
2019 Brent McPherson, Dan Bullock, Bradley Caron, Lindsey Kitchell, Soichi Hayashi, Josh Faskowitz, Olaf Sporns, Richard Betzel, Paolo Avesani, Franco Pestilli. 2019 Making network neuroscience more findable, accessible, interoperable, and reusable via brainlife.io. OHBM 2019
2019 Soichi Hayashi, Lindsey Kitchell, Brent McPherson, Bradley Caron, Daniel Bullock, Paolo Avesani, Robert Henschel, Eleftherios Garyfallidis, Lei Wang, Ivo Dinov, Franco Pestilli. Orchestrating cloud networks for discoverable, accessible, interoperable, and reusable neuroscience. OHBM 2019
2019 Bradley Caron, Lindsey Kitchell , Brent McPherson, Daniel Bullock, Soichi Hayashi, Derek Keller, Hu Cheng, Sharlene Newman, Nicholas Port, Franco Pestilli. Microstructural differences in both the white- and gray-matter tissue distinguish athletes groups. OHBM 2019
2018 Kitchell, Lindsey, Daniel Bullock, Soichi Hayashis, Franco Pestilli. Shape Analysis of White Matter Tracts via the Laplace-Beltrami Spectrum, Shape in Medical Imaging Workshop at MICCAI, (poster and publication)
2018 Kitchell, Lindsey, Daniel Bullock, Soichi Hayashis, Franco Pestilli. White Matter Tracts as Classification Features for Machine Learning. Midwest Cognitive Science Conference, Bloomington, IN (poster)
2018 F. Pestilli, L. Kitchell, B. McPherson, D. Bullock. B. Caron, E. GaryFallidis, R. Henschel, O. Sporns, L. Wang, A. Saykin, I. Dinov, S. Hayashis. A public cloud platform for large-scale data analysis, visualization and sharing of reproducible neuroscience research. Society for Neuroscience (poster)
2018 Caron, B., Keller, D, Kitchell, L, McPherson, B, Bullock, D, Hayashis, S, Cheng, H, Newman, S, Port, N, Pestilli, F. Advanced white matter mapping in the subconcussive brain. AAN Sports Concussion Conference, Indianapolis, IN (poster) 2018, Big Ten-Ivy League TBI Research Consortium Summit, Philadelpha, PA (poster) 2018, and Vision Science Research Afternoon, Bloomington, IN (poster) 2018.
2017 Kitchell, Lindsey. Is Broca’s cap really larger on the left in modern humans? Contradictory evidence via Non-rigid diffeomorphic mapping methods. American Association of Physical Anthropologists annual meeting, New Orleans, LA (poster)
2017 Kitchell, Lindsey. Evaluating Language-Related Asymmetry in Endocasts using Non-rigid Diffeomorphic Image Registration. Paleoanthropology Society annual meeting. Vancouver, CA (poster)
2017 Kitchell, Lindsey and Alex E. Badillo. The Sierra Sur in 3D: Benefits of Photogrammetry and 3D Printing for Archaeological Research in Remote Regions. Society for American Archaeology annual meeting. Vancouver, CA (podium presentation).
2016 Kitchell, Lindsey. Asymmetry of Language Related Areas on Modern Human Endocasts: contradictory evidence via non-rigid diffeomorphic registration. Indiana University Psychological and Brain Sciences, 2nd year student poster competition.
2016 Kitchell, Lindsey. Asymmetry of the Modern Human Endocranium. American Association of Physical Anthropologists annual meeting. Atlanta, GA (poster)
2016 Kitchell, Lindsey. Asymmetry of the Modern Human Endocranium. Women's Research Poster Competition | Achievements of Women in STIM. Bloomington, IN (Poster)
2015 Schoenemann, P. Tom, Lindsey Kitchell. Handedness and the evolution of tool use in humans. Society for American Archaeology annual meeting, San Francisco, CA (podium presentation)
2014 Kitchell, Lindsey, P. Tom Schoenemann. Functional Correlates of Structural Asymmetries in the Human Brain. American Association of Physical Anthropologists annual meeting, Calgary CA (poster)
2013 Kitchell, Lindsey, P. Tom Schoenemann. Structural Asymmetries in the Human Brain Assessed via MRI. American Association of Physical Anthropologists annual meeting, Knoxville, TN (podium presentation)
2013 Kitchell, Lindsey, P. Tom Schoenemann. Structural Asymmetries in the Human Brain Assessed via MRI. STARS research symposium, Indiana University (podium presentation)
2012 Kitchell, Lindsey, P. Tom Schoenemann. Structural Asymmetries in the Human Brain Assessed via MRI. Indiana University Undergraduate Research Symposium, IUPUI (poster)
2012 Kitchell, Lindsey; Francisco Parada, Brandi Emerick, Dr. Thomas Busey. Feature Selection Strategies and Perceptual Expertise in Configuration Search Tasks. Midwestern Cognitive Science Conference, Indiana University (poster)
2012 Kitchell, Lindsey; Francisco Parada, Brandi Emerick, Dr. Thomas Busey. Feature Selection Strategies and Perceptual Expertise in Configuration Search Tasks. STARS research symposium, Indiana University (poster)
2011 Kitchell, Lindsey; Francisco Parada, Brandi Emerick, Dr. Thomas Busey. Feature Selection Strategies and Perceptual Expertise in Configuration Search Tasks. Psychonomic Society Meeting, Seattle, Washington (poster)
2011 Keusch, Caitlin; Lindsey Kitchell, Matthew Rowe, Dr. Laura Schreiber. Experimental Bone Tool Manufacture: Examining the Product and Process of Bone Tool Manufacture in the Archaeological Record. Hutton Honors College IUB Undergraduate Symposium and Research Fair, Indiana University (poster)
2011 Kitchell, Lindsey. Visual Search Expertise in Video Game Playing. Midwest Undergraduate Cognitive Science Conference at Indiana University (podium presentation)
2019 Brent McPherson, Dan Bullock, Bradley Caron, Lindsey Kitchell, Soichi Hayashi, Josh Faskowitz, Olaf Sporns, Richard Betzel, Paolo Avesani, Franco Pestilli. 2019 Making network neuroscience more findable, accessible, interoperable, and reusable via brainlife.io. OHBM 2019
2019 Soichi Hayashi, Lindsey Kitchell, Brent McPherson, Bradley Caron, Daniel Bullock, Paolo Avesani, Robert Henschel, Eleftherios Garyfallidis, Lei Wang, Ivo Dinov, Franco Pestilli. Orchestrating cloud networks for discoverable, accessible, interoperable, and reusable neuroscience. OHBM 2019
2019 Bradley Caron, Lindsey Kitchell , Brent McPherson, Daniel Bullock, Soichi Hayashi, Derek Keller, Hu Cheng, Sharlene Newman, Nicholas Port, Franco Pestilli. Microstructural differences in both the white- and gray-matter tissue distinguish athletes groups. OHBM 2019
2018 Kitchell, Lindsey, Daniel Bullock, Soichi Hayashis, Franco Pestilli. Shape Analysis of White Matter Tracts via the Laplace-Beltrami Spectrum, Shape in Medical Imaging Workshop at MICCAI, (poster and publication)
2018 Kitchell, Lindsey, Daniel Bullock, Soichi Hayashis, Franco Pestilli. White Matter Tracts as Classification Features for Machine Learning. Midwest Cognitive Science Conference, Bloomington, IN (poster)
2018 F. Pestilli, L. Kitchell, B. McPherson, D. Bullock. B. Caron, E. GaryFallidis, R. Henschel, O. Sporns, L. Wang, A. Saykin, I. Dinov, S. Hayashis. A public cloud platform for large-scale data analysis, visualization and sharing of reproducible neuroscience research. Society for Neuroscience (poster)
2018 Caron, B., Keller, D, Kitchell, L, McPherson, B, Bullock, D, Hayashis, S, Cheng, H, Newman, S, Port, N, Pestilli, F. Advanced white matter mapping in the subconcussive brain. AAN Sports Concussion Conference, Indianapolis, IN (poster) 2018, Big Ten-Ivy League TBI Research Consortium Summit, Philadelpha, PA (poster) 2018, and Vision Science Research Afternoon, Bloomington, IN (poster) 2018.
2017 Kitchell, Lindsey. Is Broca’s cap really larger on the left in modern humans? Contradictory evidence via Non-rigid diffeomorphic mapping methods. American Association of Physical Anthropologists annual meeting, New Orleans, LA (poster)
2017 Kitchell, Lindsey. Evaluating Language-Related Asymmetry in Endocasts using Non-rigid Diffeomorphic Image Registration. Paleoanthropology Society annual meeting. Vancouver, CA (poster)
2017 Kitchell, Lindsey and Alex E. Badillo. The Sierra Sur in 3D: Benefits of Photogrammetry and 3D Printing for Archaeological Research in Remote Regions. Society for American Archaeology annual meeting. Vancouver, CA (podium presentation).
2016 Kitchell, Lindsey. Asymmetry of Language Related Areas on Modern Human Endocasts: contradictory evidence via non-rigid diffeomorphic registration. Indiana University Psychological and Brain Sciences, 2nd year student poster competition.
2016 Kitchell, Lindsey. Asymmetry of the Modern Human Endocranium. American Association of Physical Anthropologists annual meeting. Atlanta, GA (poster)
2016 Kitchell, Lindsey. Asymmetry of the Modern Human Endocranium. Women's Research Poster Competition | Achievements of Women in STIM. Bloomington, IN (Poster)
2015 Schoenemann, P. Tom, Lindsey Kitchell. Handedness and the evolution of tool use in humans. Society for American Archaeology annual meeting, San Francisco, CA (podium presentation)
2014 Kitchell, Lindsey, P. Tom Schoenemann. Functional Correlates of Structural Asymmetries in the Human Brain. American Association of Physical Anthropologists annual meeting, Calgary CA (poster)
2013 Kitchell, Lindsey, P. Tom Schoenemann. Structural Asymmetries in the Human Brain Assessed via MRI. American Association of Physical Anthropologists annual meeting, Knoxville, TN (podium presentation)
2013 Kitchell, Lindsey, P. Tom Schoenemann. Structural Asymmetries in the Human Brain Assessed via MRI. STARS research symposium, Indiana University (podium presentation)
2012 Kitchell, Lindsey, P. Tom Schoenemann. Structural Asymmetries in the Human Brain Assessed via MRI. Indiana University Undergraduate Research Symposium, IUPUI (poster)
2012 Kitchell, Lindsey; Francisco Parada, Brandi Emerick, Dr. Thomas Busey. Feature Selection Strategies and Perceptual Expertise in Configuration Search Tasks. Midwestern Cognitive Science Conference, Indiana University (poster)
2012 Kitchell, Lindsey; Francisco Parada, Brandi Emerick, Dr. Thomas Busey. Feature Selection Strategies and Perceptual Expertise in Configuration Search Tasks. STARS research symposium, Indiana University (poster)
2011 Kitchell, Lindsey; Francisco Parada, Brandi Emerick, Dr. Thomas Busey. Feature Selection Strategies and Perceptual Expertise in Configuration Search Tasks. Psychonomic Society Meeting, Seattle, Washington (poster)
2011 Keusch, Caitlin; Lindsey Kitchell, Matthew Rowe, Dr. Laura Schreiber. Experimental Bone Tool Manufacture: Examining the Product and Process of Bone Tool Manufacture in the Archaeological Record. Hutton Honors College IUB Undergraduate Symposium and Research Fair, Indiana University (poster)
2011 Kitchell, Lindsey. Visual Search Expertise in Video Game Playing. Midwest Undergraduate Cognitive Science Conference at Indiana University (podium presentation)
Awards and Grants
Doctoral Awards:
2019 Cognitive Science Supplemental Research funding - IU Cognitive Science Program
2018 Commendation for outstanding performance on Ph.D. qualifying examinations
2018 IUB Provost’s Travel Award for Women in Science
2018 Winner of IU Center of Excellence for Women in Technology Poster Competition
2017 Cognitive Science Supplemental Research funding - IU Cognitive Science Program
2017 Winner of IU Center of Excellence for Women in Technology Poster Competition
2016 Richard McFall Summer Research Award - IU Psychological and Brain Sciences Department
2016-2017 Evolution of Human Cognition Fellowship - Templeton Foundation and IU Cognitive Science Program
Master's Awards:
2015 Dean's List, UCL Faculty of Social and Historical Sciences
2015 UCL Institute of Archaeology Master's Prize for Outstanding Dissertations
2014 UCL Institute of Archaeology Kenyon Award
Undergraduate Awards:
2014 IU Founders Scholar
2014 IU Science, Technology and Research Scholars Program Senior Recognition Award for
Sustained Research Excellence
2013 Outstanding Research in Cognitive Science
2013 Hutton Honors Undergraduate Research Grant
2013 Corinne Jeannine Schillings Foundation Scholarship
2012 IU Cognitive Science Summer Research Fellowship
2012 Hutton Honors International Experience Grant
2012 Hutton Honors Pre-Professional Internship Grant
2011 IU Cognitive Science Summer Research Fellowship
2011 Hutton Honors Research Partnership Grant
2010 Integrative Freshman Learning Experience scholarship
2010-2014 IU Excellence Scholarship (4 years)
IU Dean’s List (7 semesters)
IU Hutton Honors College member (4 years)
IU Science, Technology, and Research Scholars (STARS) program member (4 years)
2019 Cognitive Science Supplemental Research funding - IU Cognitive Science Program
2018 Commendation for outstanding performance on Ph.D. qualifying examinations
2018 IUB Provost’s Travel Award for Women in Science
2018 Winner of IU Center of Excellence for Women in Technology Poster Competition
2017 Cognitive Science Supplemental Research funding - IU Cognitive Science Program
2017 Winner of IU Center of Excellence for Women in Technology Poster Competition
2016 Richard McFall Summer Research Award - IU Psychological and Brain Sciences Department
2016-2017 Evolution of Human Cognition Fellowship - Templeton Foundation and IU Cognitive Science Program
Master's Awards:
2015 Dean's List, UCL Faculty of Social and Historical Sciences
2015 UCL Institute of Archaeology Master's Prize for Outstanding Dissertations
2014 UCL Institute of Archaeology Kenyon Award
Undergraduate Awards:
2014 IU Founders Scholar
2014 IU Science, Technology and Research Scholars Program Senior Recognition Award for
Sustained Research Excellence
2013 Outstanding Research in Cognitive Science
2013 Hutton Honors Undergraduate Research Grant
2013 Corinne Jeannine Schillings Foundation Scholarship
2012 IU Cognitive Science Summer Research Fellowship
2012 Hutton Honors International Experience Grant
2012 Hutton Honors Pre-Professional Internship Grant
2011 IU Cognitive Science Summer Research Fellowship
2011 Hutton Honors Research Partnership Grant
2010 Integrative Freshman Learning Experience scholarship
2010-2014 IU Excellence Scholarship (4 years)
IU Dean’s List (7 semesters)
IU Hutton Honors College member (4 years)
IU Science, Technology, and Research Scholars (STARS) program member (4 years)
Research Experience
2017-present Graduate Researcher, Pestilli Research Lab, Indiana University, Bloomington
2015-2017 Graduate Researcher, Human Brain Evolution Lab, Indiana University, Bloomington
2011-2014 Undergraduate Researcher, Human Brain Evolution Lab, Indiana University, Bloomington
2010-2014 Undergraduate Researcher, Visual Perception and Electrophysiology Lab, Indiana University, Bloomington
as a IU Science, Technology, and Research Scholars (STARS) program member
2012-2014 Research Assistant, Employee, Glenn A. Black Laboratoy of Archaeology, Indiana University, Bloomington
2010-2012 Research Assistant, Volunteer, William R. Adams Zooarchaeology Lab, Indiana University, Bloomington
2015-2017 Graduate Researcher, Human Brain Evolution Lab, Indiana University, Bloomington
2011-2014 Undergraduate Researcher, Human Brain Evolution Lab, Indiana University, Bloomington
2010-2014 Undergraduate Researcher, Visual Perception and Electrophysiology Lab, Indiana University, Bloomington
as a IU Science, Technology, and Research Scholars (STARS) program member
2012-2014 Research Assistant, Employee, Glenn A. Black Laboratoy of Archaeology, Indiana University, Bloomington
2010-2012 Research Assistant, Volunteer, William R. Adams Zooarchaeology Lab, Indiana University, Bloomington
Archaeological Field Experience
2016 May-June Team member of El Proyecto Antropologico de Quiechapa
2013 July Bioarchaeological Field School at Tell Amarna, Egypt
2012 July Bioarchaeological Excavation at Badia Pozzeveri, Lucca, Italy
2011 June Archaeological Excavation at Ancient Argilos, Asprovalta, Greece
2013 July Bioarchaeological Field School at Tell Amarna, Egypt
2012 July Bioarchaeological Excavation at Badia Pozzeveri, Lucca, Italy
2011 June Archaeological Excavation at Ancient Argilos, Asprovalta, Greece
Teaching Experience
2018 Fall Semester, Graduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2018 Spring Semester, Associate Instructor, PSY-P211 Methods of Experimental Psychology, Psychological and Brain Sciences Department
2017 Fall Semester, Graduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2016 Spring Semester, Graduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2015 Fall Semester, Graduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2013 Fall Semester, Undergraduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2018 Spring Semester, Associate Instructor, PSY-P211 Methods of Experimental Psychology, Psychological and Brain Sciences Department
2017 Fall Semester, Graduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2016 Spring Semester, Graduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2015 Fall Semester, Graduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
2013 Fall Semester, Undergraduate Teaching Assistant, PSY-P435 Human Learning and Cognition Lab, Psychological and Brain Sciences Department
Outreach
2018 Explore the Brain, interactive, educational web application about the brain
2016 International Archaeology Day at the Indianapolis Children's Museum.
2016 International Archaeology Day at the Indianapolis Children's Museum.
Press/Media
Indiana University IT News - IU PhD student set to understand the shape of human white matter through high-performance computing
Skills
Programming languages:
Python, Matlab, R, HTML/CSS, A-Frame, Git, Docker, VTK, threejs
Software:
MRI/CT scan related:
Amira/Avizo, AnalyzePro, Slicer3D, ANTs, ITK-SNAP, CloudCompare, deformetrica, Osirix/Horos, Paraview, Convert3D
Neuroimaging related:
Vistasoft, mrtrix, AFQ, ANTs, SPM, FSL, Freesurfer, BrainVoyager, psychtoolbox (Matlab), MRIcro/n, Mango, Mindboggle,
3D modeling/printing related:
Agisoft Photoscan, Cura, Simplify3D, Meshlab, MeshMixer, Memento/Remake,
Other:
Adobe Photoshop, Bridge, Illustrator, EndNote
experience using IU supercomputing cluster Karst, Carbonate
Python, Matlab, R, HTML/CSS, A-Frame, Git, Docker, VTK, threejs
Software:
MRI/CT scan related:
Amira/Avizo, AnalyzePro, Slicer3D, ANTs, ITK-SNAP, CloudCompare, deformetrica, Osirix/Horos, Paraview, Convert3D
Neuroimaging related:
Vistasoft, mrtrix, AFQ, ANTs, SPM, FSL, Freesurfer, BrainVoyager, psychtoolbox (Matlab), MRIcro/n, Mango, Mindboggle,
3D modeling/printing related:
Agisoft Photoscan, Cura, Simplify3D, Meshlab, MeshMixer, Memento/Remake,
Other:
Adobe Photoshop, Bridge, Illustrator, EndNote
experience using IU supercomputing cluster Karst, Carbonate